Package interface :: Package topology :: Module GenericTopology :: Class SGT_Periodic
[hide private]
[frames] | no frames]

Class SGT_Periodic

source code

     object --+    
              |    
GenericTopology --+
                  |
                 SGT_Periodic
Known Subclasses:

Nested Classes [hide private]
  _s
Instance Methods [hide private]
 
__setattr__(self, name, value)
x.__setattr__('name', value) <==> x.name = value
source code
 
__getattr__(self, name) source code
 
__init__(self, *args, **kwargs)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
__repr__(self)
repr(x)
source code
 
__swig_destroy__(...)
 
__del__(self) source code
 
getDefaults(self, *args) source code
 
minimalDifference(self, *args) source code
 
minimalPosition(self, *args) source code
 
getVolume(self, *args) source code
 
rescaleVolume(self, *args) source code
 
getBoundingbox(self, *args) source code
 
getBoundaryConditionsBox(self, *args) source code
 
checkMoleculePairDistances(self, *args) source code
 
minimalImage(self, *args) source code

Inherited from GenericTopology: getScope, make, makeSCPISM, setExclusion, uncacheCellList

Inherited from GenericTopology (private): _print

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __sizeof__, __str__, __subclasshook__

Static Methods [hide private]

Inherited from GenericTopology: getKeyword

Class Variables [hide private]
  __swig_setmethods__ = {'LJScalingFactor': <built-in function G...
  __swig_getmethods__ = {'LJScalingFactor': <built-in function G...

Inherited from GenericTopology: keyword, scope

Properties [hide private]
  boundaryConditions

Inherited from GenericTopology: LJScalingFactor, angles, atomTypes, atoms, bondRattleShakeConstraints, bonds, coulombScalingFactor, degreesOfFreedom, dihedrals, doSCPISM, exclude, exclusions, forceFieldFlag, iSGNumMols, implicitSolvent, impropers, isgLJParms, lennardJonesParameters, max, min, minimalMolecularDistances, molecules, rb_dihedrals, time

Inherited from object: __class__

Method Details [hide private]

__setattr__(self, name, value)

source code 

x.__setattr__('name', value) <==> x.name = value

Overrides: GenericTopology.__setattr__

__getattr__(self, name)
(Qualification operator)

source code 
Overrides: GenericTopology.__getattr__

__init__(self, *args, **kwargs)
(Constructor)

source code 

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: GenericTopology.__init__

__repr__(self)
(Representation operator)

source code 

repr(x)

Overrides: _swig_repr

__swig_destroy__(...)

 
Overrides: _GenericTopology.delete_GenericTopology

__del__(self)
(Destructor)

source code 
Overrides: GenericTopology.__del__

getDefaults(self, *args)

source code 
Overrides: GenericTopology.getDefaults

minimalDifference(self, *args)

source code 
Overrides: GenericTopology.minimalDifference

minimalPosition(self, *args)

source code 
Overrides: GenericTopology.minimalPosition

getVolume(self, *args)

source code 
Overrides: GenericTopology.getVolume

rescaleVolume(self, *args)

source code 
Overrides: GenericTopology.rescaleVolume

getBoundingbox(self, *args)

source code 
Overrides: GenericTopology.getBoundingbox

getBoundaryConditionsBox(self, *args)

source code 
Overrides: GenericTopology.getBoundaryConditionsBox

checkMoleculePairDistances(self, *args)

source code 
Overrides: GenericTopology.checkMoleculePairDistances

minimalImage(self, *args)

source code 
Overrides: GenericTopology.minimalImage

Class Variable Details [hide private]

__swig_setmethods__

Value:
{'LJScalingFactor': <built-in function GenericTopology_LJScalingFactor\
_set>,
 'angles': <built-in function GenericTopology_angles_set>,
 'atomTypes': <built-in function GenericTopology_atomTypes_set>,
 'atoms': <built-in function GenericTopology_atoms_set>,
 'bondRattleShakeConstraints': <built-in function GenericTopology_bond\
RattleShakeConstraints_set>,
 'bonds': <built-in function GenericTopology_bonds_set>,
...

__swig_getmethods__

Value:
{'LJScalingFactor': <built-in function GenericTopology_LJScalingFactor\
_get>,
 'angles': <built-in function GenericTopology_angles_get>,
 'atomTypes': <built-in function GenericTopology_atomTypes_get>,
 'atoms': <built-in function GenericTopology_atoms_get>,
 'bondRattleShakeConstraints': <built-in function GenericTopology_bond\
RattleShakeConstraints_get>,
 'bonds': <built-in function GenericTopology_bonds_get>,
...

Property Details [hide private]

boundaryConditions

Get Method:
_GenericTopology.SGT_Periodic_boundaryConditions_get(...)
Set Method:
_GenericTopology.SGT_Periodic_boundaryConditions_set(...)