Package interface :: Package topology :: Module _TopologyUtilities
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Module _TopologyUtilities

Functions [hide private]
 
RealAbs(...)
 
SWIG_PyInstanceMethod_New(...)
 
Vector3DBlock___add__(...)
 
Vector3DBlock___div__(...)
 
Vector3DBlock___iadd__(...)
 
Vector3DBlock___isub__(...)
 
Vector3DBlock___mul__(...)
 
Vector3DBlock___sub__(...)
 
Vector3DBlock_boundingbox(...)
 
Vector3DBlock_c_get(...)
 
Vector3DBlock_c_set(...)
 
Vector3DBlock_clear(...)
 
Vector3DBlock_empty(...)
 
Vector3DBlock_intoAdd(...)
 
Vector3DBlock_intoAssign(...)
 
Vector3DBlock_intoSubtract(...)
 
Vector3DBlock_intoWeighted(...)
 
Vector3DBlock_intoWeightedAdd(...)
 
Vector3DBlock_intoWeightedSubtract(...)
 
Vector3DBlock_push_back(...)
 
Vector3DBlock_resize(...)
 
Vector3DBlock_size(...)
 
Vector3DBlock_sum(...)
 
Vector3DBlock_swap(...)
 
Vector3DBlock_swigregister(...)
 
Vector3DBlock_vec_get(...)
 
Vector3DBlock_vec_set(...)
 
Vector3DBlock_zero(...)
 
addVelocityVirial(...)
 
angularMomentum(...)
 
angularMomentumSolute(...)
 
atomTypeToSymbolName(...)
 
buildMolecularCenterOfMass(...)
 
buildMolecularMomentum(...)
 
buildRattleShakeBondConstraintList(...)
 
build_angle_list(...)
 
centerOfMass(...)
 
computeMolecularPressure(...)
 
computePhiDihedral(...)
 
computePhiDihedralEnergy(...)
 
computePressure(...)
 
delete_Vector3DBlock(...)
 
general_rotation(...)
 
getAtomsBondedtoDihedral(...)
 
getNonWaterAtoms(...)
 
inertiaMomentum(...)
 
inertiaMomentumSolute(...)
 
kineticEnergy(...)
 
kineticEnergyForAtomType(...)
 
kineticEnergyForNonWater(...)
 
kineticEnergyForWater(...)
 
linearMomentum(...)
 
linearMomentumSolute(...)
 
molecularCenterOfMass(...)
 
molecularKineticEnergy(...)
 
molecularMomentum(...)
 
new_Vector3DBlock(...)
 
randomVelocity(...)
 
remAng(...)
 
remLin(...)
 
removeAngularMomentum(...)
 
removeLinearMomentum(...)
 
rotateDihedral(...)
 
set_angles(...)
 
temperature(...)
 
temperatureForAtomType(...)
 
temperatureForNonWater(...)
 
temperatureForWater(...)
 
velocityVirial(...)
Variables [hide private]
  ALL = 2
  IGNORE_WATER = 0
  ONLY_WATER = 1
  X_AXIS = 0
  Y_AXIS = 1
  Z_AXIS = 2
  __package__ = None